Insertion junction: CLIP2.078061_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078061
Chromosome:chromosome 3
Location:9252822
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g800424 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCCTCGGTGCTGGGCGACAGGTTGACAGCCTTGGGTCCCCAGGCCAG
Internal bar code:AGTCATAAAACTGTCGCTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:296
LEAP-Seq percent confirming:4.54545
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACCTGGGTGGGGAGTAC
Suggested primer 2:CTCCAATCCTCCCCAAACCC