Insertion junction: CLIP2.078062_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078062
Chromosome:chromosome 10
Location:6162693
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g462400 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGGATTCATGCATGCCTCACGCCTCAATCTTATCTTAGATAGATACA
Internal bar code:CAGCTGGGACACGTGTATGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:109
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGATGATGAGGCGGAGGAG
Suggested primer 2:AGGGGAATGCGTGTGTACTG