Insertion junction: CLIP2.078075_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078075
Chromosome:chromosome 3
Location:4202522
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g173550 (1 of 2) PTHR35100//PTHR35100:SF1 - FAMILY NOT NAMED // F15H11.13 PROTEIN CDS
Cre03.g173600 (1 of 11) IPR000626//IPR029071 - Ubiquitin domain // Ubiquitin-related domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCTTTGAGCCCGCGCGGTGAGTTTCAAACCTTGAGTCGCGCCGATG
Internal bar code:TTTGGACCATTTGGCACAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:122
LEAP-Seq percent confirming:3.57143
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGATGTTAGAGGCGCCC
Suggested primer 2:CATCGGCAAGTCATTCAGCG