Insertion junction: CLIP2.078081_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078081
Chromosome:chromosome 3
Location:9118073
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g200879 CSR10 Carbohydrate sulfotransferase-related 10; (1 of 1) IPR000104//IPR000863//IPR012884//IPR027417 - Antifreeze protein, type I // Sulfotransferase domain // Excisionase-like // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCAGCAGCGGGCGCAGCAGCGGGGGCAGCTGCTGGCGCAGCTGCTGG
Internal bar code:CTTACTACACGGTCTCCACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:272
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGAGACACCTTCACCGT
Suggested primer 2:TCCCCTGCTCTTACTACCCC