Insertion junction: CLIP2.078086_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.078086
Chromosome:chromosome 3
Location:7791175
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g203200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTGGAGAGGCCAGCCACGACCAGTCCTGAGCCGCCGACTGCTGCTGC
Internal bar code:TTTATGCGATGTAATAAGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:418
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAATGTACTCCGCGCTCG
Suggested primer 2:TGTGCACACTGGATGAGACC