Insertion junction: CLIP2.078088_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078088
Chromosome:chromosome 6
Location:8619885
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g309826 (1 of 1) 1.1.1.100//2.3.1.41//2.3.1.86 - 3-oxoacyl-[acyl-carrier-protein] reductase // Beta-ketoacyl-[acyl-carrier-protein] synthase I / KAS I // Fatty-acyl-CoA synthase / Yeast fatty acid synthase intron
Cre06.g800756 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATTATGGTCGCGGGGACGGTATGCGGCCCCAAAAAAACAAGTCATCGA
Internal bar code:AGCAAGACGTTGTTGTGCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:339
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAGTTAAGCGGGTAGGG
Suggested primer 2:ATGTCGCAGTGAGTTCAGCA