Insertion junction: CLIP2.078091_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078091
Chromosome:chromosome 12
Location:9472787
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g540650 (1 of 2) PTHR19241:SF62 - PROTEIN SCARLET intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCGGACCAGATCGGCGAGACGTTTGAAACACTTTCTGGGGCGCGTGA
Internal bar code:TATTGAATGTCTGGTATTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:215
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGCAGTGCTTCACCTAC
Suggested primer 2:AGTTGAAGGTCTGCTCCACG