Insertion junction: CLIP2.078094_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078094
Chromosome:chromosome 16
Location:994582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648900 (1 of 2) PF02696 - Uncharacterized ACR, YdiU/UPF0061 family (UPF0061) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAACTGCATGCGCCACACACGACCTGAACGATTTGTGCTCTTCACAAT
Internal bar code:GGTCTTGGTTAGAAGTGGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1825
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGACTGCAGCACAACAC
Suggested primer 2:AGACTGGGCTAGAGAGGGTG