Insertion junction: CLIP2.078106_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078106
Chromosome:chromosome 17
Location:5690433
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g740430 (1 of 1) IPR003663//IPR005828//IPR011701//IPR020846 - Sugar/inositol transporter // Major facilitator, sugar transporter-like // Major facilitator superfamily // Major facilitator superfamily domain intron
Cre17.g802121 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGCGTTAAGAAGGAAACGAAAGCCCGCTATTCACGGACAGCCGGCC
Internal bar code:TGACCAGACGCAGAAGGAAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:214
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTGACACAGACAGGAGC
Suggested primer 2:CAGTCTCCCGGGTCAGTCTA