Insertion junction: CLIP2.078110_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078110
Chromosome:mitogenome
Location:1555
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreMt.g802337 cob,801484,ChrepMp01 (1 of 1) K00412 - ubiquinol-cytochrome c reductase cytochrome b subunit (CYTB, petB); cytochrome b CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCATTTGACTAGCTAGCATCATACCAGCTAGAGAACCACCGTTCCAAG
Internal bar code:TGTCTGGAAACAAAAAAAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:427
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTGTACACGAGTTGCTT
Suggested primer 2:GAGCCAAGAACAAAGCACCG