Insertion junction: CLIP2.078111_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078111
Chromosome:chromosome 11
Location:810739
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467637 (1 of 1) IPR009057//IPR009060//IPR015940 - Homeodomain-like // UBA-like // Ubiquitin-associated domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATCCCAGGCCTCCTGGTCCAGCCACACTGACCATCATCACCGCATGCA
Internal bar code:CAATTTCACAGCAGAAGCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2624
LEAP-Seq percent confirming:86.5385
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTAGTAGCTCCGCAGAG
Suggested primer 2:GTTGCCTCAAGCTGCTGAAC