Insertion junction: CLIP2.078115_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078115
Chromosome:chromosome 16
Location:2707195
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g661850 (1 of 2) PF08332 - Calcium/calmodulin dependent protein kinase II association domain (CaMKII_AD) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCTCTACTTCAATGCATTGATGGGGCCGGCGAGCGACTAGGCAATCTC
Internal bar code:TTTCTTTATCCCGCTTCCGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:367
LEAP-Seq percent confirming:45.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCTTGGAGTTGAGCGTCT
Suggested primer 2:CTCGTGCTTCCTTGTCAGGT