Insertion junction: CLIP2.078121_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078121
Chromosome:chromosome 17
Location:6529602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g744797 (1 of 1) PF05623 - Protein of unknown function (DUF789) (DUF789) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTATGTGCTTATTTGGGTGGGTTGCACTCAAGGGATACAAACCTTAC
Internal bar code:TTGTGGAACTCTAATGTGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1480
LEAP-Seq percent confirming:90.411
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTTTCGTTTTGCGCACGA
Suggested primer 2:GCGCGAGATAACAGCACTTG