Insertion junction: CLIP2.078125_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078125
Chromosome:chromosome 8
Location:3147762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376200 (1 of 1) IPR000104//IPR013026//IPR019734 - Antifreeze protein, type I // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGTCCACTCTGTCACCGCACTCGCGCTCGCATTGCGCTTGCCACCAC
Internal bar code:TCGAGGGATCTCTTTATTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2840
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAACATGCCTTTCAACCG
Suggested primer 2:CGTTGGGGTGGACATAGCTT