Insertion junction: CLIP2.078146_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078146
Chromosome:chromosome 10
Location:2496196
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435950 OPR47 OctotricoPeptide Repeat protein 47 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTACCTTGCATCCGTCAGCTAGCGCTCAAGCGGAAGCCACACAGCAG
Internal bar code:TATCCGCAGGGTTTTGGCTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1290
LEAP-Seq percent confirming:81.3559
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAATGCTCGTGGTAGGAG
Suggested primer 2:TACAACGACCACCTGAACCG