Insertion junction: CLIP2.078151_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078151
Chromosome:chromosome 5
Location:2930671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre24.g755247 (1 of 1) IPR003010//IPR020683 - Carbon-nitrogen hydrolase // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTTGAGAGGCACGGAGCAGTAGGGTGTCATCCAGAGACTAGCGGATT
Internal bar code:GTTTCTACGTTGTCTATTTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2656
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGACATCCTTCAACAGCA
Suggested primer 2:GGTCTGAGCGAGGATAGCAC