Insertion junction: CLIP2.078153_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078153
Chromosome:plastome
Location:132530
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802319 2717001,ChreCp055,rps11 30S ribosomal protein S11; (1 of 1) IPR019981 - Ribosomal protein S11, bacterial-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGGGATACCTGTTTTTTCACGAATAACACTTACTTTAATACCAGCT
Internal bar code:GCTCGGTTGCGGGCTGCCGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:415
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCCAAAGCAAAGCACAA
Suggested primer 2:ATGGGTTACCTGGGACTCGA