Insertion junction: CLIP2.078154_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078154
Chromosome:chromosome 16
Location:636009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691900 PUS19 RNA pseudouridine synthase; (1 of 1) PTHR11142:SF9 - TRNA PSEUDOURIDINE SYNTHASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGTCGTACACTTGGACACAAACAGGCAGCGCAATGCCATCTCCACAGC
Internal bar code:CGCATATAGGTGGGACTCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1439
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGCCCCATAACGCATAC
Suggested primer 2:ACACGTTGGCAAATGCACTC