Insertion junction: CLIP2.078156_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078156
Chromosome:chromosome 7
Location:2730220
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g331200 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACACCTCCAGCGGCGACACGGGCAGCACCTCTGAGTTGAGCATGCGC
Internal bar code:CAGACTGACCGCCTGAAAAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:424
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCGCAAGCACTCTGGA
Suggested primer 2:CCACTCCCACTGAGCTCTTG