Insertion junction: CLIP2.078161_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078161
Chromosome:chromosome 17
Location:6610481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745497 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGATGACACCCAATTGAGGTCGCCAACTGCAAAATGTTATGCACGCT
Internal bar code:GAGCTCGAGTTAAGAGGGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1571
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTGATCGGCAACAGCAG
Suggested primer 2:AGGAAGCCCGAGTAAAGCAC