Insertion junction: CLIP2.078163_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078163
Chromosome:chromosome 7
Location:2330276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g328050 (1 of 1) IPR005491 - EMSY N-terminal 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAACCTGCGCAAGTTTTGGCGACGCTCAACAGCTGTAGTAACTCCAAAC
Internal bar code:GTGGGCATATCTGGTTGGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4161
LEAP-Seq percent confirming:81.3187
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTTCCACTGTACACTGT
Suggested primer 2:GTTGCTGACTCACTCCTGCT