Insertion junction: CLIP2.078164_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078164
Chromosome:chromosome 6
Location:3184540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g276200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTGGGAAAGGCAGTCCCCGACCAGGTCGCAAAATCCGACCTCGGCTT
Internal bar code:CTGCCTCGACCGATCATTCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3521
LEAP-Seq percent confirming:91.0112
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGTATGATTGGTGTGCC
Suggested primer 2:CATCCTACGCCATTTGCACG