Insertion junction: CLIP2.078176_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078176
Chromosome:chromosome 14
Location:1216939
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g615800 (1 of 3) PTHR31563:SF1 - ION CHANNEL POLLUX-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCTGGTTTGGGCCAGGGCACGTCACGTGGTGCCAACTGAAGTGCCACG
Internal bar code:GCACGAGTGAGATACACAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:337
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CATACCGCCCATAACCCTCC
Suggested primer 2:ACCTCTACATGTTGCCCTGC