Insertion junction: CLIP2.078178_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078178
Chromosome:chromosome 8
Location:3947847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382250 (1 of 4) PTHR11584//PTHR11584:SF377 - SERINE/THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTCTGTGAGAGTGATGAGGCCAGCGTGCATCGTACTGGGAGGCATCT
Internal bar code:TCCGTTCTACATGTGCCGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2278
LEAP-Seq percent confirming:14.9425
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:74
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGAGTACTACCGGCACG
Suggested primer 2:TCGCACCTCACACTAAACCC