Insertion junction: CLIP2.078187_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.078187
Chromosome:chromosome 17
Location:6792017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g746847 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCTTCGTGTTCTTCTTGCTTTTGTTTACCGGCGCTCAGAGTAGTGCCT
Internal bar code:AGAGGTTATATGGACCGGCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2055
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCGGTGCGTACTTTGTGT
Suggested primer 2:AAATGGGCCTCAAGTCTCCG