Insertion junction: CLIP2.078192_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078192
Chromosome:chromosome 12
Location:3730392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAGCTCCGCTGGAGCCTTTGAGGGTCTTTGAAGGTCTGTGGAGATAAC
Internal bar code:ACCGTACACCGTAGAAAGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3354
LEAP-Seq percent confirming:71.9101
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGGGCCTGGTGAAGTAG
Suggested primer 2:ACTCAGTCATTGACGTGCGT