Insertion junction: CLIP2.078208_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078208
Chromosome:chromosome 6
Location:6738627
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g295550 (1 of 1) IPR006045//IPR011051//IPR013096 - Cupin 1 // RmlC-like cupin domain // Cupin 2, conserved barrel 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCAGTAAATCAAACACCGCACTTACAAATTCACACCACTGGAACACTC
Internal bar code:TAGCGTCTCAATTGTGCCCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1009
LEAP-Seq percent confirming:21.2121
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACCGAGTCCAAGCTCT
Suggested primer 2:TCGCCTATTCGACCTGATGC