Insertion junction: CLIP2.078217_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078217
Chromosome:chromosome 10
Location:466787
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g420900 HEL44 (1 of 1) K13181 - ATP-dependent RNA helicase DDX27 [EC:3.6.4.13] (DDX27, DRS1); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGAAGTCCAAGGCGGCTGCCAACAAGGCTGAAAAGCGCGCCGAGCG
Internal bar code:GTCGACCTTATAAAGTTACCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:403
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTCCTACTGTCCCACGGC
Suggested primer 2:ACACAGGCCGTCAACATGAT