Insertion junction: CLIP2.078218_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078218
Chromosome:chromosome 8
Location:517688
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g359400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTGTCCGTCTTGCGCCCGCCAGATAAGCTTCTGTTTGCCTACACGTC
Internal bar code:AGATTCGCATTGACCAATGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1799
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGATGAGAACGAGAGCG
Suggested primer 2:CAAGTTGGGCCCTGATAGCA