Insertion junction: CLIP2.078220_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078220
Chromosome:chromosome 9
Location:4914969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403145 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCCTCAATGGCCTGGGACAGGAACTCAGGAAGATTCGGGACAGCGCC
Internal bar code:TTCCATTTACGGGAGATTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:258
LEAP-Seq percent confirming:3.0303
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGCGTGAAAACACACCC
Suggested primer 2:GCGAAGTGTGTGTGTGTGTG