Insertion junction: CLIP2.078228_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.078228
Chromosome:chromosome 12
Location:5705390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532151 ERM7 (1 of 13) PTHR13018//PTHR13018:SF5 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED // PHOSPHATE METABOLISM PROTEIN 7; ERD4-related membrane protein 3'UTR
Cre12.g532200 AOA2 Putative alcohol O-acetyltransferase; (1 of 4) 2.3.1.84 - Alcohol O-acetyltransferase / AATASE 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGCCAGTTTCCCATGACTGGCCAACTAACACTCGCCCAGTCGCATGC
Internal bar code:TCCCATATCGTTATTGTAGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1740
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGTGAGTGCCTGGTGTC
Suggested primer 2:CGAATAGCCTTTCAGCACGC