Insertion junction: CLIP2.078229_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078229
Chromosome:chromosome 3
Location:5614713
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185850 CPK2 (1 of 1) PTHR10584//PTHR10584:SF162 - SUGAR KINASE // SUBFAMILY NOT NAMED; putative carbohydrate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTAAAAATCAATCGTGAGAAAGCGGATCCCGCCTTGCCTCCCGCGCAG
Internal bar code:ATGCGGATCGTGGGAATGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1542
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACATGACAGTGGCAGGG
Suggested primer 2:GGAAAGGAAGGCAAGACGGA