Insertion junction: CLIP2.078239_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078239
Chromosome:chromosome 6
Location:1211451
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g258400 (1 of 1) PF08737 - Rgp1 (Rgp1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTGGGTGTGTGGGCAGAGGCAGCGTGCAGTGAGGGCAACGGCCGTTT
Internal bar code:TCAGATAGGTGGTTTGCCGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:139
LEAP-Seq percent confirming:10.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:100
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCTCGAACTCAACCCCA
Suggested primer 2:AACAGTCCTACCACTTGCCG