Insertion junction: CLIP2.078243_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078243
Chromosome:chromosome 8
Location:1412895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364400 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTTATAATCTGCAGTTCGGTGTCCTCTCTCATCGTGTACAATGGCCA
Internal bar code:ATGATAGCAACTTTCCTAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2759
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGCAACAATTACCTACG
Suggested primer 2:TGCATGCTGAACCCTTTTGC