Insertion junction: CLIP2.078245_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078245
Chromosome:chromosome 6
Location:7762764
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g303050 NIT3 NADH-cytochrome b5 reductase domain protein; (1 of 2) 1.7.1.1 - Nitrate reductase (NADH) / Nitrate reductase (NADH(2)) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACAAGATATTTGACTCCCCTCGCATGGGAAAAGTGGGCTGCGCCCAC
Internal bar code:AGAAAATTGCCCTTCTTCCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3255
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CATCACTCCCACACCCTGTC
Suggested primer 2:CCGGGAGATGAAGTAGACGC