Insertion junction: CLIP2.078246_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078246
Chromosome:chromosome 1
Location:2907897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018100 (1 of 1) 3.1.3.16//3.1.3.27//3.1.3.48 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase // Phosphatidylglycerophosphatase // Protein-tyrosine-phosphatase / PTPase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTTTTACCACCTCTAAGAACTTACCCCAACAATACTACACGAGGTTT
Internal bar code:TTGTGGGATGACCCAGTATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1723
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCTTGCACCCACGTTAT
Suggested primer 2:GCAGTGCAAGAAAGTGCCTC