Insertion junction: CLIP2.078247_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078247
Chromosome:chromosome 3
Location:335903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144584 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCGATGCTGTCGCACGCACTCATGCAGCTCCCGCCACGCCACCGCAT
Internal bar code:CAGCTTCGGGCAGCATCAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2771
LEAP-Seq percent confirming:67.2414
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCATGCCCAGCGATTTCA
Suggested primer 2:CAAGTTCAACTGGGTGCAGC