Insertion junction: CLIP2.078248_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078248
Chromosome:chromosome 3
Location:6205394
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g191350 (1 of 1) K05642 - ATP-binding cassette, subfamily A (ABC1), member 2 (ABCA2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCATCACGCTTAGCAAAGGCCAGCGTAGCAGCTCACCCCGCGCATGT
Internal bar code:TTCCGGAGTGGTCCGTATTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:824
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCGATTTTAGCTTGGAGG
Suggested primer 2:ATGATGTGCAGGGACAGCTC