Insertion junction: CLIP2.078252_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078252
Chromosome:chromosome 7
Location:2645094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330500 (1 of 5) PF04232 - Stage V sporulation protein S (SpoVS) (SpoVS) 5'UTR
Cre07.g330550 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCGTTTATTTTAATACTACCGCGACGTTTGGGAGGATTGGCTGCCTT
Internal bar code:CGTTAGAGTCACATCACGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1145
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGAATTCCGTGCACAGCAGA
Suggested primer 2:GAGTGGGGCATCACGATAGG