Insertion junction: CLIP2.078252_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078252
Chromosome:chromosome 7
Location:2645106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330500 (1 of 5) PF04232 - Stage V sporulation protein S (SpoVS) (SpoVS) 5'UTR
Cre07.g330550 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGCCAGGTTCACCTACTGAGCGACACCGGGACTGAAAAGTGGAAGTC
Internal bar code:TCCACTCGATTACCCAGCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1119
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGGGGCATCACGATAGG
Suggested primer 2:AGAATTCCGTGCACAGCAGA