Insertion junction: CLIP2.078253_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078253
Chromosome:chromosome 9
Location:6173368
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g413150 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAAGGGTGGTGGAAATAGATGCGTCAATCGGTCGTGAGCAACCAGGG
Internal bar code:TACGTTTATTTCAATACTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:377
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGACTGCCCCCACGTATA
Suggested primer 2:TCCCTCGTTCACTCTTGTGC