Insertion junction: CLIP2.078254_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078254
Chromosome:chromosome 17
Location:4585046
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g732050 AGE3 DNA repair glycosylase; (1 of 1) K10773 - endonuclease III (NTH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTAAATACCAGCCCAAACTAAACCGAACCCAATGCAAAAGAGCG
Internal bar code:GGCTTTGCCGACAATCTCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:546
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GAACAGTGGGGTCGTTAGCA
Suggested primer 2:TATCACACTGTGGCTGCAGG