Insertion junction: CLIP2.078257_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078257
Chromosome:chromosome 10
Location:2803139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438750 (1 of 1) PTHR31394:SF1 - TRANSMEMBRANE PROTEIN 199 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCTGCGGGTCACCGAGGGCGTGGCCACATTGTTAGAGGAGGCTGCTA
Internal bar code:TAGTGTCTTAAATTTTCTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4440
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAAAGGGAGGGCAGAGAC
Suggested primer 2:ACACACACACACACACAGGT