Insertion junction: CLIP2.078260_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078260
Chromosome:plastome
Location:4817
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802264 petD,ChreCp002,2717021 cytochrome b6/f complex subunit 4; (1 of 1) K02637 - cytochrome b6-f complex subunit 4 (petD) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTATCTCTAAAAACCAGGGCTTGCCCAATCAACAATTTAAAGCTTATTT
Internal bar code:TGTCACTGTTGCCTGGAGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCGTGATAAGGCCTGCA
Suggested primer 2:CCCCTTCGGGCAAGTAAACT