Insertion junction: CLIP2.078264_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078264
Chromosome:chromosome 6
Location:899531
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g255800 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGGCGCAGCACCCGCGCCACATGACCCTGCTGCGGGAGCACGGCAGG
Internal bar code:TATACCCCAAAGACCGTAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:473
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGTTCAATGTAGCTCCC
Suggested primer 2:CAAGAGCAGCAACAGCACG