Insertion junction: CLIP2.078272_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078272
Chromosome:chromosome 8
Location:1618026
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g365720 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTTAAAAA
Internal bar code:TCTTCTAGTGAGTTATTCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:654
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AATATCCCACCCCCTCCTCC
Suggested primer 2:CAAAGCGTGTCCTGTGTGTG