Insertion junction: CLIP2.078286_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078286
Chromosome:mitogenome
Location:903
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreMt.g802337 cob,801484,ChrepMp01 (1 of 1) K00412 - ubiquinol-cytochrome c reductase cytochrome b subunit (CYTB, petB); cytochrome b CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCACCCCACAACACATTGTACCAGAGTGGTACTTCTTGTGGGTATAC
Internal bar code:TTCTTTGTTCCATGGTTCTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:210
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGTGAAGTGTGCGTTG
Suggested primer 2:ACCATGGGGCCAAATGTCTT