Insertion junction: CLIP2.078294_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078294
Chromosome:chromosome 10
Location:2230962
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g433750 PAP1 Class-I Nucleotidyl-transferase 1, nuclear; (1 of 1) K14376 - poly(A) polymerase (PAP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGAACTGGCCGCTTCACGCGCCGCAGTACTTCGCTCTGCGCCGCTCCG
Internal bar code:TAATGGGCTGTGACAGGTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:773
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTCTTCTCCTGGCGTCC
Suggested primer 2:GAGCACGTTCACTTTCAGCG