Insertion junction: CLIP2.078303_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078303
Chromosome:chromosome 2
Location:5152373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111850 (1 of 5) PF00536 - SAM domain (Sterile alpha motif) (SAM_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAAGAACGCACTTTGGGAGCTTCAGGAGCTAAGCCTGAGGAGCTCTT
Internal bar code:AGCACACGTCATCTTGGTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1746
LEAP-Seq percent confirming:84.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGGCGTCTTAGTGCTAT
Suggested primer 2:AACAGCGCTAACTGCATCCT