Insertion junction: CLIP2.078304_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078304
Chromosome:chromosome 3
Location:5780280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187650 (1 of 5) PF04884 - Vitamin B6 photo-protection and homoeostasis (DUF647) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTAACCACCGACACCACCGCTCCCTTCACGTCGCACCTTGCACGTCCC
Internal bar code:CGATACTCGTAGTCGTTAGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1713
LEAP-Seq percent confirming:57.377
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTCATTGAACCAGGCGC
Suggested primer 2:TTTGTTGCGCTGCTTTACCC